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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9293536 chr5:72491876 A/G MPP5 chr14:67707826-67802536:+ 0.17 5.95 5.2E-9 Box Plot
THCA rs9293537 chr5:72497495 C/A MPP5 chr14:67707826-67802536:+ 0.17 5.9 7.07E-9 Box Plot
THCA rs9295432 chr6:19407446 G/A NAGLU chr17:40688190-40696467:+ -0.28 -5.89 7.24E-9 Box Plot
THCA rs9295689 chr6:26455811 T/C ZNF322B chr9:99957633-99961910:- 0.45 8.06 6.27E-15 Box Plot
THCA rs9295694 chr6:26512994 A/T ZNF322B chr9:99957633-99961910:- 0.54 10.3 1.35E-22 Box Plot
THCA rs9295695 chr6:26528250 C/T ZNF322B chr9:99957633-99961910:- -0.54 -10.3 1.35E-22 Box Plot
THCA rs9295696 chr6:26550288 C/T ZNF322B chr9:99957633-99961910:- 0.62 9.48 1.18E-19 Box Plot
THCA rs9295698 chr6:26566099 T/A ZNF322B chr9:99957633-99961910:- 0.58 11.37 1.15E-26 Box Plot
THCA rs9295699 chr6:26566409 G/C ZNF322B chr9:99957633-99961910:- 0.58 11.37 1.15E-26 Box Plot
THCA rs9295701 chr6:26627508 T/C ZNF322B chr9:99957633-99961910:- 0.73 15.3 2.8E-43 Box Plot
THCA rs9295704 chr6:26704816 A/G ZNF322B chr9:99957633-99961910:- -0.56 -9.25 7.34E-19 Box Plot
THCA rs9295740 chr6:27689502 G/A BTN3A2 chr6:26365387-26378548:+ -0.28 -5.94 5.48E-9 Box Plot
THCA rs9295755 chr6:28033174 C/T BTN3A2 chr6:26365387-26378548:+ 0.27 5.92 6.2E-9 Box Plot
THCA rs9295758 chr6:28120663 C/G BTN3A2 chr6:26365387-26378548:+ -0.3 -6.3 6.95E-10 Box Plot
THCA rs9295759 chr6:28124469 C/T BTN3A2 chr6:26365387-26378548:+ -0.3 -6.31 6.3E-10 Box Plot